C library for high-throughput sequencing data formats
✂️ ⚡ Rapid haploid variant calling and core genome alignment
This vCard PHP library can easily parse or generate/export vCards as .vcf
Convert a VCF into a MAF, where each variant is annotated to only one of all possible gene isoforms
Toolset for SV simulation, comparison and filtering
annotate a VCF with other VCFs/BEDs/tabixed files
Structural variant toolkit for VCFs
Personalized Genomics and Proteomics. Main diet: Ensembl, side dishes: SNPs
Convert SNPs in VCF format to PHYLIP, NEXUS, binary NEXUS, or FASTA alignments for phylogenetic analysis
#编辑器#Syntax highlighting for computational biology
Personal Cancer Genome Reporter (PCGR)
A collection of scripts and notes related to genomics and bioinformatics
A modern compressor for genomic files (FASTQ, SAM/BAM/CRAM, VCF, FASTA, GFF/GTF/GVF, 23andMe...), up to 5x better than gzip and faster too
machine learning for genomic variants