proteomics

🧬 gget enables efficient querying of genomic reference databases

#算法刷题#The codebase of the OpenMS project

Protein-protein, protein-peptide and protein-DNA docking framework based on the GSO algorithm

A collection of Galaxy-related training material

A Python API for the RCSB Protein Data Bank (PDB)

Personalized Genomics and Proteomics. Main diet: Ensembl, side dishes: SNPs

Proteomics search & quantification so fast that it feels like magic

A cross-platform proteomics data analysis suite

Algorithm for ultra-scale multiple sequence alignments (3M protein sequences in 5 minutes and 24 GB of RAM)

Various teaching material

A modular, python-based framework for mass spectrometry. Powered by nbdev.

sensitive and precise assembly of short sequencing reads

Base Classes and Functions for Mass Spectrometry and Proteomics

#计算机科学#Deep learning framework for proteomics

Ultrafast, comprehensive peptide identification for mass spectrometry–based proteomics

PeptideProphet, PTMProphet, ProteinProphet, iProphet, Abacus, and FDR filtering

Olink R package: A collection of functions to facilitate analysis of proteomic data from Olink. The goal of this package is to help users extract biological insights from proteomic data run on the Ol...

A Python-based Effective Feature Generation Tool from DNA, RNA, and Protein Sequences

Using R and Bioconductor packages for the analysis and comprehension of proteomics data.

The Proteomics sample metadata: Standard for experimental design annotation in proteomics datasets