sequence-analysis

Toolkit for processing sequences in FASTA/Q formats

A comprehensive library for computational molecular biology

BWK awk modified for biological data

The modern C++ library for sequence analysis. Contains version 3 of the library and API docs.

Fast alignment and preprocessing of chromatin profiles

Fast multi-line FASTA/Q reader in several programming languages

MSA(Multiple Sequence Alignment) visualization python package for sequence analysis

Cython bindings and Python interface to HMMER3.

A fast multiple sequence alignment program.

A Python package for CD-HIT, clustering protein or nucleotide sequences.

Program for estimating πN/πS, dN/dS, and other diversity measures from next-generation sequencing data

#计算机科学#iLearnPlus is the first machine-learning platform with both graphical- and web-based user interface that enables the construction of automated machine-learning pipelines for computational analysis and...

Open source bioinformatics and computational biology toolbox written in F#. This is the core package containing type models and parsers/writers.

#计算机科学#

Physicochemical properties, indices and descriptors for amino-acid sequences.

Highly customizable, ambiguity-aware dotplots for visual sequence analyses

A collection of simple JavaScript programs for generating, formatting, and analyzing short DNA and protein sequences. The Sequence Manipulation Suite is commonly used by molecular biologists, for teac...

Gfapy: a flexible and extensible software library for handling sequence graphs in Python

Sequence alignment tools

Tools and software library developed by the ONT Applications group