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集合主题趋势排行榜
#

sequence-analysis

Website
Wikipedia
https://static.github-zh.com/github_avatars/lh3?size=40
lh3 / seqtk

Toolkit for processing sequences in FASTA/Q formats

Bioinformaticssequence-analysis
C 1.47 k
14 天前
https://static.github-zh.com/github_avatars/biotite-dev?size=40
biotite-dev / biotite

A comprehensive library for computational molecular biology

Bioinformaticscomputational-biologysequence-analysispdb-files
Python 812
5 天前
https://static.github-zh.com/github_avatars/lh3?size=40
lh3 / bioawk

BWK awk modified for biological data

Bioinformaticssequence-analysis
C 621
3 年前
https://static.github-zh.com/github_avatars/seqan?size=40
seqan / seqan3

The modern C++ library for sequence analysis. Contains version 3 of the library and API docs.

sequence-analysisC++Bioinformaticsblastsequence-alignmentfastqmodern
C++ 429
5 天前
https://static.github-zh.com/github_avatars/haowenz?size=40
haowenz / chromap

Fast alignment and preprocessing of chromatin profiles

Bioinformaticssequence-analysisgenomics
C++ 201
11 天前
https://static.github-zh.com/github_avatars/lh3?size=40
lh3 / readfq

Fast multi-line FASTA/Q reader in several programming languages

Bioinformaticssequence-analysis
C 176
4 年前
https://static.github-zh.com/github_avatars/TimoLassmann?size=40
TimoLassmann / kalign

A fast multiple sequence alignment program.

sequence-alignmentBioinformaticssequence-analysis
C 139
1 年前
https://static.github-zh.com/github_avatars/althonos?size=40
althonos / pyhmmer

Cython bindings and Python interface to HMMER3.

Bioinformaticspython-bindingspython-librarysequence-analysis
Cython 137
1 个月前
https://static.github-zh.com/github_avatars/moshi4?size=40
moshi4 / pyMSAviz

MSA(Multiple Sequence Alignment) visualization python package for sequence analysis

BioinformaticsmatplotlibPythonsequence-analysis可视化genomicsmultiple-sequence-alignmentsequence-alignment
Python 130
6 个月前
https://static.github-zh.com/github_avatars/yuanx749?size=40
yuanx749 / py-cdhit

A Python package for CD-HIT, clustering protein or nucleotide sequences.

packagesequence-analysis工具Bioinformatics
Python 124
7 个月前
https://static.github-zh.com/github_avatars/chasewnelson?size=40
chasewnelson / SNPGenie

Program for estimating πN/πS, dN/dS, and other diversity measures from next-generation sequencing data

sequence-analysisevolutionvcfPerl
Perl 115
2 年前
https://static.github-zh.com/github_avatars/BioFSharp?size=40
BioFSharp / BioFSharp

Open source bioinformatics and computational biology toolbox written in F#. This is the core package containing type models and parsers/writers.

BioinformaticsdatasciencebiologyF#sequence-analysisDocker
F# 112
2 个月前
https://static.github-zh.com/github_avatars/Superzchen?size=40
Superzchen / iLearnPlus

#计算机科学#iLearnPlus is the first machine-learning platform with both graphical- and web-based user interface that enables the construction of automated machine-learning pipelines for computational analysis and...

sequence-analysis机器学习feature-selectionpredictionPython深度学习
Python 108
1 年前
https://static.github-zh.com/github_avatars/vanessajurtz?size=40
vanessajurtz / lasagne4bio

#计算机科学#

深度学习biologysequence-analysis
Jupyter Notebook 107
7 年前
https://static.github-zh.com/github_avatars/althonos?size=40
althonos / peptides.py

Physicochemical properties, indices and descriptors for amino-acid sequences.

Bioinformaticssequence-analysisprotein
Python 94
2 个月前
https://static.github-zh.com/github_avatars/flexidot-bio?size=40
flexidot-bio / flexidot

Highly customizable, ambiguity-aware dotplots for visual sequence analyses

sequence-analysis可视化biologyBioinformatics
Python 91
10 天前
https://static.github-zh.com/github_avatars/paulstothard?size=40
paulstothard / sequence_manipulation_suite

A collection of simple JavaScript programs for generating, formatting, and analyzing short DNA and protein sequences. The Sequence Manipulation Suite is commonly used by molecular biologists, for teac...

protein-sequencessequence-analysis
74
7 个月前
https://static.github-zh.com/github_avatars/ggonnella?size=40
ggonnella / gfapy

Gfapy: a flexible and extensible software library for handling sequence graphs in Python

Bioinformaticsgraphssequence-analysisAssembly
Python 67
8 个月前
https://static.github-zh.com/github_avatars/BioJulia?size=40
BioJulia / BioAlignments.jl

Sequence alignment tools

sequence-alignmentsequence-analysisbiologyBioinformatics
Julia 63
10 个月前
https://static.github-zh.com/github_avatars/nanoporetech?size=40
nanoporetech / wub

Tools and software library developed by the ONT Applications group

sequence-analysisnanopore
Python 63
4 年前
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