pdb-files · GitHub Topics

horsicq / PDBRipper

PDBRipper is a utility for extract an information from PDB-files.

pdb-files pdb-parser pdb 逆向工程 Hacktoberfest hacktoberfest2023

C 838

6 天前

biotite-dev / biotite

A comprehensive library for computational molecular biology

Bioinformatics computational-biology sequence-analysis pdb-files

Python 812

6 天前

BioPandas / biopandas

Working with molecular structures in pandas DataFrames

molecular-structures pandas-dataframe pdb protein-structure pdb-files drug-discovery computational-biology Bioinformatics Molecule

Python 730

10 个月前

mdtraj / mdtraj

An open library for the analysis of molecular dynamics trajectories

Molecular Dynamics Python pdb pdb-files

Python 643

3 天前

project-gemmi / gemmi

macromolecular crystallography library and utilities

protein-structure molecular-structures pdb-files

C++ 267

5 天前

HoShiMin / formatPE

A bunch of parsers for PE and PDB formats in C++

C++header-only modern-cpp pdb pdb-files pdb-parser pe pe-analyzer pe-file pe-format portable-executable

C++ 247

1 年前

molstar / VSCoding-Sequence

VSCode Extension for interactively visualising protein structure data in the editor

Visual Studio Code VS Code Extension protein protein-structure pdb pdb-files Molecule structure

TypeScript 109

7 个月前

Biswa96 / PDBDownloader

Standalone program to download PDB Symbol files for debugging without WDK

pdb pdb-files Windows C 逆向工程 reversing

C 76

6 年前

gu1729 / pdbdump

Dump content of PDB files (program databases) in JSON, XML, SQLite3, CSV etc.

Code developer-tools Code quality Windows pdb pdb-files

C++ 48

4 年前

microsoft / SQLCallStackResolver

A sample tool for users of Microsoft SQL Server to aid in troubleshooting otherwise difficult to diagnose issues. Provided AS-IS - see SUPPORT.md.

sql-server debugging pdb pdb-files SRE symbols 工具

C# 47

18 天前

Broihon / Symbol-Parser

Small class to parse debug info from PEs, download their respective PDBs from the Microsoft Public Symbol Server and calculate RVAs of functions

pdb-files

C++ 44

2 年前

jgreener64 / pdb-benchmarks

Benchmarking common tasks on proteins in various languages and packages

pdb pdb-files benchmarks comparison Bioinformatics

Python 41

4 年前

PDB-REDO / libcifpp

Library containing code to manipulate mmCIF and PDB files

pdb-files protein-structure

C++ 35

13 天前

smx-smx / PDBSharp

Fast and cross-platform parser for Microsoft PDB files

Microsoft pdb-files pdb-parser debug Parser Library C#

C# 33

7 个月前

SeanCline / PythonSymbols

A WinDbg symbol server for all recent versions of CPython.

windbg pdb pdb-files Python

Python 24

2 个月前

a-r-j / CPDB

#计算机科学#Cython implementation of PDB -> DataFrame parsing

Bioinformatics 深度学习机器学习 pdb pdb-files pdb-parser protein protein-structure

Cython 23

2 年前

PombertLab / 3DFI

The 3DFI pipeline predicts the 3D structure of proteins and searches for structural homology in the 3D space.

pdb-files

Perl 19

1 年前

johnnytam100 / pdb2uniprot

A Python script to map PDB ID + chain ID to UniProt ID.

Bioinformatics mapping pdb-files

Python 16

1 年前

lucagl / MOAD_ligandFinder

A script able to extract ligands from pdb structure(s) and remove them from the original structure. The ligands are identified according to the *valid* ligands found in the binding MOAD database. The ...

pdb-files

Python 15

3 年前

mmagnus / emacs-pdb-mode

pdb-mode is an emacs-lisp minor mode for Emacs to perform a number of useful editing functions on Protein DataBank (PDB) formatted files. XEmacs and/or GNU Emacs are available for most computing platf...

pdb-files pdb rna-structure-prediction

Emacs Lisp 14

3 年前