Fast and accurate de novo assembler for long reads
#计算机科学#Clair3 - Symphonizing pileup and full-alignment for high-performance long-read variant calling
Reference-guided transcript discovery and quantification for long read RNA-Seq data
Highly parallelised multi-taxonomic profiling of shotgun short- and long-read metagenomic data
Nanopore RNA-Seq data from the Singapore Nanopore-Expression Project
abPOA: an SIMD-based C library for fast partial order alignment using adaptive band
Tandem repeat expansion detection or genotyping from long-read alignments
Pipeline for calling structural variations in whole genomes sequencing Oxford Nanopore data
Graph-based assembly phasing
#计算机科学#ClairS - a deep-learning method for long-read somatic small variant calling
Long-reads Gap-free Chromosome-scale Assembler
A fast tool for hybrid genome assembly of long and short reads
#计算机科学#ClairS-TO - a deep-learning method for tumor-only somatic variant calling
memory efficient, fast & precise taxnomomic classification system for metagenomic read mapping
Scalable long read self-correction and assembly polishing with multiple sequence alignment