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#

Common Workflow Language

css logo

CWL documents describe workflows made of command line data analysis tools in a portable, reproducible, and reusable fashion.

Created by Peter Amstutz, John Chilton, Michael R. Crusoe, Nebojša Tijanić, and the CWL Community

发布于 January 2015

Repository
common-workflow-language
Website
www.commonwl.org
Wikipedia
维基百科
common-workflow-language/common-workflow-language
https://static.github-zh.com/github_avatars/common-workflow-language?size=40
common-workflow-language / common-workflow-language

Repository for the CWL standards. Use https://cwl.discourse.group/ for support 😊

Common Workflow Languagecontainersworkflowsscienceworkflow
Common Workflow Language 1.47 k
6 个月前
https://static.github-zh.com/github_avatars/DataBiosphere?size=40
DataBiosphere / toil

A scalable, efficient, cross-platform (Linux/macOS) and easy-to-use workflow engine in pure Python.

Common Workflow LanguagePythonmesosslurmworkflowpipelineAmazon Web ServicesKubernetes
Python 912
6 天前
https://static.github-zh.com/github_avatars/arvados?size=40
arvados / arvados

An open source platform for managing and analyzing biomedical big data

arvadosRubyPythonGoDockerclustercloudCommon Workflow LanguagebigdataBioinformaticsgenomicsworkflowAmazon Web ServicesGoogle 云Azureworkflow-engine
Go 404
4 天前
https://static.github-zh.com/github_avatars/common-workflow-language?size=40
common-workflow-language / cwltool

Common Workflow Language reference implementation

Common Workflow Languageworkflowscontainersscience
Python 350
13 天前
https://static.github-zh.com/github_avatars/rabix?size=40
rabix / composer

#编辑器#Visual and code editor for Common Workflow Language

Common Workflow Languageideeditor
TypeScript 305
2 年前
https://static.github-zh.com/github_avatars/CBICA?size=40
CBICA / CaPTk

#计算机科学#Cancer Imaging Phenomics Toolkit (CaPTk) is a software platform to perform image analysis and predictive modeling tasks. Documentation: https://cbica.github.io/CaPTk

cancer-imaging-research机器学习C++nci-itcrnihmedical-image-processingcancerimage-analysisanalyticsCommon Workflow Languagemedical-image-computingMedical imaging
C++ 190
2 年前
https://static.github-zh.com/github_avatars/Barski-lab?size=40
Barski-lab / cwl-airflow

Python package to extend Airflow functionality with CWL1.1 support

workflowCommon Workflow Languagecontainersdag
Python 188
2 年前
https://static.github-zh.com/github_avatars/EBI-Metagenomics?size=40
EBI-Metagenomics / emg-viral-pipeline

VIRify: detection of phages and eukaryotic viruses from metagenomic and metatranscriptomic assemblies

nextflowvirusesCommon Workflow Languageworkflowpipeline
Python 134
14 天前
https://static.github-zh.com/github_avatars/reanahub?size=40
reanahub / reana

REANA: Reusable research data analysis platform

reproducible-researchKubernetescontainersCommon Workflow Language
Python 132
1 个月前
https://static.github-zh.com/github_avatars/dockstore?size=40
dockstore / dockstore

An app store for scientific workflows, tools, notebooks, and services

DockerCommon Workflow LanguagecontainersBioinformaticsnextflowworkflow
Java 127
9 天前
https://static.github-zh.com/github_avatars/galaxyproject?size=40
galaxyproject / planemo

Command-line utilities to assist in developing Galaxy and Common Workflow Language artifacts - including tools, workflows, and training materials.

usegalaxySDK命令行界面clickHacktoberfest
Python 93
1 个月前
https://static.github-zh.com/github_avatars/ga4gh?size=40
ga4gh / workflow-execution-service-schemas

The WES API is a standard way to run and manage portable workflows.

workflowCommon Workflow Language
85
9 个月前
https://static.github-zh.com/github_avatars/common-workflow-library?size=40
common-workflow-library / bio-cwl-tools

CWL CommandLineTool descriptions for biology/life-sciences related applications

Common Workflow Language
Common Workflow Language 79
3 个月前
https://static.github-zh.com/github_avatars/rabix?size=40
rabix / cwl-svg

A library for generating an interactive SVG visualization of CWL workflows

Common Workflow LanguageSVGworkflow可视化Bioinformatics
TypeScript 77
10 个月前
https://static.github-zh.com/github_avatars/rabix?size=40
rabix / bunny

[Legacy] Executor for CWL workflows. Executes sbg:draft-2 and CWL 1.0

Common Workflow LanguageworkflowDockerexecutorJava
Common Workflow Language 74
5 年前
https://static.github-zh.com/github_avatars/4dn-dcic?size=40
4dn-dcic / tibanna

Tibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integration Center) to process data. Tibanna supports CWL/WDL (w/ doc...

pipelinesAmazon Web ServicesDockeraws-lambdaBioinformaticsCommon Workflow Languagesnakemakeconda
Python 69
2 个月前
https://static.github-zh.com/github_avatars/rabix?size=40
rabix / benten

#编辑器#A language server for Common Workflow Language

Common Workflow Languageworkfloweditorlanguage-serveride
Python 65
2 年前
https://static.github-zh.com/github_avatars/ResearchObject?size=40
ResearchObject / ro-crate-py

Python library for RO-Crate

metadatagalaxyCommon Workflow Language
Python 64
18 天前
https://static.github-zh.com/github_avatars/rabix?size=40
rabix / cwl-ts

Typescript data model for Common Workflow Language

workflowCommon Workflow LanguageTypeScript
TypeScript 49
2 年前
https://static.github-zh.com/github_avatars/Duke-GCB?size=40
Duke-GCB / calrissian

CWL on Kubernetes

Common Workflow LanguageKubernetes
Python 48
6 个月前
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