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集合主题趋势排行榜
#

whole-slide-imaging

Website
Wikipedia
mahmoodlab/CLAM
https://static.github-zh.com/github_avatars/mahmoodlab?size=40
mahmoodlab / CLAM

#计算机科学#Open source tools for computational pathology - Nature BME

histopathologypathologywhole-slide-imagingcomputational-pathology深度学习digital-pathology
Python 1.43 k
5 个月前
https://static.github-zh.com/github_avatars/baidu-research?size=40
baidu-research / NCRF

#计算机科学#Cancer metastasis detection with neural conditional random field (NCRF)

深度学习pathologywhole-slide-imaging
Python 763
2 年前
https://static.github-zh.com/github_avatars/cgohlke?size=40
cgohlke / tifffile

Read and write TIFF files.

PythonImagetiffImageJNumPywhole-slide-imaging
Python 625
5 天前
https://static.github-zh.com/github_avatars/TissueImageAnalytics?size=40
TissueImageAnalytics / tiatoolbox

#计算机科学#Computational Pathology Toolbox developed by TIA Centre, University of Warwick.

Pythoncomputational-pathologywhole-slide-imaging深度学习digital-pathologyhistopathologyimage-analysis机器学习medical-image-analysis
Python 460
3 天前
https://static.github-zh.com/github_avatars/binli123?size=40
binli123 / dsmil-wsi

#计算机科学#DSMIL: Dual-stream multiple instance learning networks for tumor detection in Whole Slide Image

深度学习whole-slide-imagingself-attentionhistopathology深度神经网络semi-supervised-learningself-supervised-learningPyTorchtransformer
Python 436
1 年前
https://static.github-zh.com/github_avatars/slideflow?size=40
slideflow / slideflow

#计算机科学#Powerful, open-source AI tools for digital pathology.

Python机器学习深度学习pathologycomputational-pathologywhole-slide-imaginghistopathology
Python 326
7 天前
https://static.github-zh.com/github_avatars/nadeemlab?size=40
nadeemlab / DeepLIIF

#数据仓库#Deep Learning Inferred Multiplex ImmunoFluorescence for IHC Image Quantification (https://deepliif.org) [Nature Machine Intelligence'22, CVPR'22, MICCAI'23, Histopathology'23, MICCAI'24]

深度学习multitask-learningpathologysegmentationPyTorch数据集image-segmentationdigital-pathologysuper-resolutionwhole-slide-imaging
Python 210
3 天前
https://static.github-zh.com/github_avatars/ChongQingNoSubway?size=40
ChongQingNoSubway / DGR-MIL

Code for paper: DGR-MIL: Exploring Diverse Global Representation in Multiple Instance Learning for Whole Slide Image Classification [ECCV 2024]

whole-slide-imaginghistopathologyself-attentiontransformer
Python 158
8 个月前
https://static.github-zh.com/github_avatars/MarvinLer?size=40
MarvinLer / tcga_segmentation

Whole Slide Image segmentation with weakly supervised multiple instance learning on TCGA | MICCAI2020 https://arxiv.org/abs/2004.05024

image-segmentationhistopathologywhole-slide-imagingpathologycomputational-pathologyMedical imagingsegmentation
Python 139
4 年前
https://static.github-zh.com/github_avatars/ChongQingNoSubway?size=40
ChongQingNoSubway / PDL

Code for the paper " PDL: Regularizing Multiple Instance Learning with Progressive Dropout Layers "

histopathologywhole-slide-imaging
Python 110
1 年前
https://static.github-zh.com/github_avatars/DIAGNijmegen?size=40
DIAGNijmegen / pathology-whole-slide-data

#计算机科学#A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.

histopathologyiteratorpathologyPythonwhole-slide-imaging深度学习Windows Subsystem for Android (WSA)computational-pathology
Python 105
9 个月前
https://static.github-zh.com/github_avatars/KatherLab?size=40
KatherLab / STAMP

#计算机科学#Solid Tumor Associative Modeling in Pathology

Bioinformatics深度学习digital-pathologyhistopathologypathologyresearchwhole-slide-imagingagentsmcpmcp-server
Python 84
5 天前
https://static.github-zh.com/github_avatars/SBU-BMI?size=40
SBU-BMI / wsinfer

#计算机科学#🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images

深度学习pathologywhole-slide-imagingPyTorchclassification
Python 79
1 年前
https://static.github-zh.com/github_avatars/liupei101?size=40
liupei101 / Pipeline-Processing-TCGA-Slides-for-MIL

This repo provides the pipeline of processing TCGA whole-slide images for downstream pathology analysis.

whole-slide-imaging
Python 74
5 个月前
https://static.github-zh.com/github_avatars/YashSharma?size=40
YashSharma / C2C

#计算机科学#Implementation of Cluster-to-Conquer: A Framework for End-to-End Multi-Instance Learning for Whole Slide Image Classification approach.

深度学习whole-slide-imaginghistopathology
Python 62
4 年前
https://static.github-zh.com/github_avatars/jgamper?size=40
jgamper / compay-syntax

🔬 Syntax - the arrangement of whole-slide-images and their image tiles to create well-formed computational pathology pipelines.

computational-pathologyMedical imagingopenslideslide-imageswhole-slide-imaging
Python 55
3 年前
https://static.github-zh.com/github_avatars/lucasrla?size=40
lucasrla / wsi-preprocessing

Simple library for preprocessing histopathological whole-slide images (WSI) into tiles (a.k.a. patches) towards deep learning

libvipsopenslidewhole-slide-imagingpathologypreprocessingfastaiPyTorchhistopathology
Python 55
2 年前
https://static.github-zh.com/github_avatars/PingjunChen?size=40
PingjunChen / pyslide

#计算机科学#Digital Pathology Whole Slide Image Analysis Toolbox

pathologywhole-slide-imaging深度学习Pythonimage-analysiscomputational-pathology
Python 49
2 年前
https://static.github-zh.com/github_avatars/cpystan?size=40
cpystan / WSI-VQA

#计算机科学#[ECCV 2024] Official Implementation of 《WSI-VQA: Interpreting Whole Slide Image by Generative Question Answering》

aigc深度学习multi-modalpathologywhole-slide-imaging
Python 49
8 个月前
https://static.github-zh.com/github_avatars/PingjunChen?size=40
PingjunChen / tissueloc

Whole Slide Digital Pathology Image Tissue Localization

whole-slide-imagingpathologycomputational-pathologyPython
Python 44
2 年前
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