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集合主题趋势排行榜
#

whole-slide-imaging

Website
Wikipedia
mahmoodlab/CLAM
https://static.github-zh.com/github_avatars/mahmoodlab?size=40
mahmoodlab / CLAM

#计算机科学#Open source tools for computational pathology - Nature BME

histopathologypathologywhole-slide-imagingcomputational-pathology深度学习digital-pathology
Python 1.35 k
2 个月前
https://static.github-zh.com/github_avatars/qupath?size=40
qupath / qupath

#计算机科学#QuPath - Open-source bioimage analysis for research

图像处理digital-pathologypathology机器学习whole-slide-imagingImageJOpenCVGroovyJavaFXcomputational-pathology
Java 1.17 k
2 天前
https://static.github-zh.com/github_avatars/baidu-research?size=40
baidu-research / NCRF

#计算机科学#Cancer metastasis detection with neural conditional random field (NCRF)

深度学习pathologywhole-slide-imaging
Python 765
2 年前
https://static.github-zh.com/github_avatars/computationalpathologygroup?size=40
computationalpathologygroup / ASAP

Program for the analysis and visualization of whole-slide images in digital pathology

whole-slide-imaging
C++ 642
2 年前
https://static.github-zh.com/github_avatars/cgohlke?size=40
cgohlke / tifffile

Read and write TIFF files.

PythonImagetiffImageJNumPywhole-slide-imaging
Python 606
5 天前
https://static.github-zh.com/github_avatars/openslide?size=40
openslide / openslide

C library for reading virtual slide images

pathologywhole-slide-imagingC
C 437
1 个月前
https://static.github-zh.com/github_avatars/TissueImageAnalytics?size=40
TissueImageAnalytics / tiatoolbox

#计算机科学#Computational Pathology Toolbox developed by TIA Centre, University of Warwick.

Pythoncomputational-pathologywhole-slide-imaging深度学习digital-pathologyhistopathologyimage-analysis机器学习medical-image-analysis
Python 431
3 天前
https://static.github-zh.com/github_avatars/binli123?size=40
binli123 / dsmil-wsi

#计算机科学#DSMIL: Dual-stream multiple instance learning networks for tumor detection in Whole Slide Image

深度学习whole-slide-imagingself-attentionhistopathology深度神经网络semi-supervised-learningself-supervised-learningPyTorchtransformer
Python 422
1 年前
https://static.github-zh.com/github_avatars/ome?size=40
ome / bioformats

Bio-Formats is a Java library for reading and writing data in life sciences image file formats. It is developed by the Open Microscopy Environment. Bio-Formats is released under the GNU General Publ...

JavaImagemetadatawhole-slide-imaging
Java 397
25 天前
https://static.github-zh.com/github_avatars/slideflow?size=40
slideflow / slideflow

#计算机科学#Powerful, open-source AI tools for digital pathology.

Python机器学习深度学习pathologycomputational-pathologywhole-slide-imaginghistopathology
Python 306
10 天前
https://static.github-zh.com/github_avatars/camicroscope?size=40
camicroscope / caMicroscope

Digital pathology image viewer with support for human/machine generated annotations and markups.

whole-slide-imagingdigital-pathologyslide-images
JavaScript 272
14 天前
https://static.github-zh.com/github_avatars/nadeemlab?size=40
nadeemlab / DeepLIIF

#数据仓库#Deep Learning Inferred Multiplex ImmunoFluorescence for IHC Image Quantification (https://deepliif.org) [Nature Machine Intelligence'22, CVPR'22, MICCAI'23, Histopathology'23, MICCAI'24]

深度学习multitask-learningpathologysegmentationPyTorch数据集image-segmentationdigital-pathologysuper-resolutionwhole-slide-imaging
Python 198
11 天前
https://static.github-zh.com/github_avatars/ChongQingNoSubway?size=40
ChongQingNoSubway / DGR-MIL

Code for paper: DGR-MIL: Exploring Diverse Global Representation in Multiple Instance Learning for Whole Slide Image Classification [ECCV 2024]

whole-slide-imaginghistopathologyself-attentiontransformer
Python 154
6 个月前
https://static.github-zh.com/github_avatars/MarvinLer?size=40
MarvinLer / tcga_segmentation

Whole Slide Image segmentation with weakly supervised multiple instance learning on TCGA | MICCAI2020 https://arxiv.org/abs/2004.05024

image-segmentationhistopathologywhole-slide-imagingpathologycomputational-pathologyMedical imagingsegmentation
Python 137
4 年前
https://static.github-zh.com/github_avatars/cylab-tw?size=40
cylab-tw / bluelight

a browser-based DICOM viewer

dicomHTMLbluelightdicom-viewerwhole-slide-imaging
JavaScript 133
5 天前
https://static.github-zh.com/github_avatars/ChongQingNoSubway?size=40
ChongQingNoSubway / PDL

Code for the paper " PDL: Regularizing Multiple Instance Learning with Progressive Dropout Layers "

histopathologywhole-slide-imaging
Python 110
1 年前
https://static.github-zh.com/github_avatars/DIAGNijmegen?size=40
DIAGNijmegen / pathology-whole-slide-data

#计算机科学#A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.

histopathologyiteratorpathologyPythonwhole-slide-imaging深度学习Windows Subsystem for Android (WSA)computational-pathology
Python 102
7 个月前
https://static.github-zh.com/github_avatars/btcrabb?size=40
btcrabb / SlideSeg

A Python module that produces image patches and annotation masks from whole slide images for deep learning in digital pathology.

digital-pathologysemantic-segmentationwhole-slide-imagingconvolutional-neural-networks
Jupyter Notebook 78
3 年前
https://static.github-zh.com/github_avatars/SBU-BMI?size=40
SBU-BMI / wsinfer

#计算机科学#🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images

深度学习pathologywhole-slide-imagingPyTorchclassification
Python 70
1 年前
https://static.github-zh.com/github_avatars/liupei101?size=40
liupei101 / Pipeline-Processing-TCGA-Slides-for-MIL

This repo provides the pipeline of processing TCGA whole-slide images for downstream pathology analysis.

whole-slide-imaging
Python 68
3 个月前
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