dauparas / LigandMPNN

Code for the ProteinMPNN paper

Public RFDiffusionAA repo

ProtTrans is providing state of the art pretrained language models for proteins. ProtTrans was trained on thousands of GPUs from Summit and hundreds of Google TPUs using Transformers Models.

A Protein Large Language Model for Multi-Task Protein Language Processing

#计算机科学#Benchmarking framework for protein representation learning. Includes a large number of pre-training and downstream task datasets, models and training/task utilities. (ICLR 2024)

Evolutionary couplings from protein and RNA sequence alignments

Official repository for the paper "Tranception: Protein Fitness Prediction with Autoregressive Transformers and Inference-time Retrieval"

COLMAP - Structure-from-Motion and Multi-View Stereo

A collection of papers on diffusion models for 3D generation.

Awesome Protein Representation Learning